Functional Genomics for studying rejection in Heart Transplantation

Heart transplantation is the definitive therapy for end-stage heart failure but is complicated by recipient immune responses to the allograft, often resulting in cardiac allograft rejection. Upon presentation of allo-antigen by donor- or recipient antigen-presenting cells, recipient T-lymphocytes develop to T-helper cells (CD4+ T-cells) and cytotoxic T-cells (CD8 T-cells) and B-lymphocytes develop to plasma cells producing specific clones of antibodies. These immunocompetent cells destroy the foreign cells. In addition, an inflammatory response involving monocytes and macrophages participates in this alloimmune response. The differentiation of this alloimmune response is orchestrated by a subtle regulation of soluble immune mediators, called cytokines.

Different forms of rejection are being recognized, acute cellular (or T-cell-mediated) rejection, acute antibody-mediated (or B-cell-mediated) rejection, mixed rejection and chronic rejection, also termed transplant vasculopathy.

We are currently exploring the data generated from the CARGO study to better understand this three conditions in collaboration with the Columbia Genome Center using conventional immunology techniques and microarray technology within a systems biology theoretical framework.

 

Ongoing projects:

Molecular mechanisms of rejection

Gene expression profiles of Antibody-mediated rejection

Gene expression profiles of Chronic Rejection (Transplant Vasculopathy)

Reconstruction of regulatory cellular networks during rejection and quiescence

 

Brief Overview of Methods used in Genomic and Systems Biology Research

 

The Cardiac Allograft Rejection Gene Expression Observation (CARGO) study

The longterm objective of the Cardiac Allograft Rejection Gene Expression Observation (CARGO) was to develop a diagnostic gene set based on a specifically developed leukocyte gene chip to noninvasively diagnose cardiac allograft rejection. The hypothesis was that there exists peripheral blood mononuclear cell gene expression patterns that allow for sensitive and specific detection of rejection. Brief summary of the CARGO study.

 

Ongoing projects:

IMAGE Study

CARGO II Study

 

Project related publications:

Starling R et al. J Heart Lung Transplant 2006;25(12):1389

Deng MC et al. Am J Transplant 2006;5:150

Evans RW et al.  Am J Transplant 2005;5:1553

Marboe CC et al. J Heart Lung Transplant 2005;24:S219

 

Project related presentations:

CARGO study & Systems Biology Perspectives

Biology of Human Long-Term Mechanical Circulatory Support - SCCOR

Infection is the most common cause of death in long-term Mechanical Circulatory Support-Device-supported heart failure patients, while both infection and bleeding complications are the major drivers of cost.  Cell transplantation offers the promise of actively promoting regeneration of myocardial function, allowing potential temporary device use as a “bridge to recovery” rather than permanent implantation as a destination.  These questions are addressed in this translational SCCOR which consists of clinical and basic research components (Funding: NIH-NHLBI HL 077096-01).

SCCOR Grant FTP >>

 

Ongoing projects:

Gene expression during clinical mechanical circulatory support

Animal models of mechanical circulatory support

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Project related publications:

Manuel Prinz von Bayern Development of A Murine Ventricular Assist Device Transcutaneous Drive-Line Model

Latif F. Challenges of long-term mechanical circulatory support therapy, Expert Rev Med Devices. 2008 Jul;5(4):413-414

Asai T et al. Cellular coating of the left ventricular assist device textured polyurethane membrane reduces adhesion of Staphylococcus aureus. J Thorac Cardiovasc Surg. 2007 May;133(5):1147-53.

Cadeiras M et al. Curr Opinion Organ Transplantation. 2005;10(4):369

Asai T et al. J Heart Lung Transplant. 2005;24(8):1129

 

Role of Interleukin-6 in Early Remodeling After Myocardial Infarction

The longterm objective is to elucidate the role of interleukin-6 cytokines in the process of heart failure remodeling. The hypothesis to be tested is that ventricular restricted disruption of the gp130 system accelerates deleterious early remodeling by abrogating an important myocyte survival pathway, and that consequently, gp130-dependent cytokines may represent a novel therapeutic strategy for preventing heart failure after myocardial infarction (Funding: AHA-GIA 0151112T).

 

Ongoing projects:

Animal models of functional genomics in heart failure.

 

Project related publications:

Plenz GA et al. Circulation. 2003;108(17):e129

 

The Mechanical Circulatory Support Device Database of the ISHLT

The longterm objective was to develop a web-based database to capture all mechanical circulatory support device implantations worldwide. Dr. Deng has served as the first elected Medical Director of this Database from 2001-2005 (Funding: International Society for Heart and Lung Transplantation).

 

Deng MC. Eur Heart J. 2005 May;26(10):953.

Deng MC et al. J Heart Lung Transplant. 2005 Sep;24(9):1182

 

Publications

List of publications queried from NLM Pubmed database. Search criteria: Deng+MC[Author].

Pubmed Search "Deng MC"

 

 

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Cardiac Transplantation Research - Division of Cardiology - Department of Medicine - CUMC - NYPH - Columbia University - New York City

This site was last updated 09/23/08